chr13:32913457:C>A Detail (hg19) (BRCA2)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
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Information

Genome

Assembly	Position
hg19	chr13:32,913,457-32,913,457
hg38	chr13:32,339,320-32,339,320 View the variant detail on this assembly version.

HGVS

BRCA2

Type	Transcript	Protein
RefSeq	NM_000059.3:c.4965C>A	NP_000050.2:p.Tyr1655Ter
Ensemble	ENST00000544455.6:c.4965C>A	ENST00000544455.6:p.Tyr1655Ter
	ENST00000380152.8:c.4965C>A	ENST00000380152.8:p.Tyr1655Ter
	ENST00000713678.1:c.4965C>A	ENST00000713678.1:p.Tyr1655Ter
	ENST00000530893.7:c.4596C>A	ENST00000530893.7:p.Tyr1532Ter
	ENST00000700202.2:c.4965C>A	ENST00000700202.2:p.Tyr1655Ter
	ENST00000713680.1:c.4965C>A	ENST00000713680.1:p.Tyr1655Ter

Summary

MGeND

Clinical significance	Pathogenic
Variant entry	2
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance	Pathogenic
Review star
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Links

BRCA2

Type	Database	ID	Link
Gene	MIM	600185	OMIM
	HGNC	1101	HGNC
	Ensembl	ENSG00000139618	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC
	MONDO

Disease area statistics

MGeND

Clinical significance	Last evaluated	Condition	Origin	Submission ID	Submitter	Institute	Citation	Comment	Image
Pathogenic	2018/01/13	breast, unspecified	germline	MGS000028 (TMGS000049)	Yukihide Momozawa	RIKEN	30287823
Pathogenic	2021/03/19	breast	germline	MGS000048 (TMGS000112)	Yukihide Momozawa Koichi Matsuda	RIKEN The University of Tokyo

ClinVar

Clinical significance	Last evaluated	Review status	Condition	Origin	Links
Pathogenic	2016-09-08	reviewed by expert panel	Breast-ovarian cancer, familial, susceptibility to, 2	germline	Detail
Pathogenic	2024-01-27	criteria provided, multiple submitters, no conflicts	hereditary breast ovarian cancer syndrome	germline unknown	Detail
Pathogenic	2023-10-01	criteria provided, multiple submitters, no conflicts	not provided	germline unknown	Detail
Pathogenic	2023-02-27	criteria provided, multiple submitters, no conflicts	Hereditary cancer-predisposing syndrome	germline	Detail
Pathogenic	2023-09-02	criteria provided, single submitter	Familial cancer of breast	unknown	Detail
Pathogenic		criteria provided, single submitter	FLG-related disorder	germline	Detail

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.240	Breast-ovarian cancer, familial, susceptibility to, 2	NA	CLINVAR		Detail
0.174	Breast Cancer, Familial	NA	CLINVAR		Detail
0.391	Hereditary Breast and Ovarian Cancer Syndrome	NA	CLINVAR		Detail
0.128	Neoplastic Syndromes, Hereditary	NA	CLINVAR		Detail
0.560	FANCONI ANEMIA, COMPLEMENTATION GROUP D1	NA	CLINVAR		Detail
0.001	Epithelial ovarian cancer	Three ovarian cancer cell lines (PEO1, PEO4, and PEO6) were derived from a BRCA2...	BeFree	19654294	Detail
0.002	Malignant neoplasm of ovary	Three ovarian cancer cell lines (PEO1, PEO4, and PEO6) were derived from a BRCA2...	BeFree	19654294	Detail
0.002	ovarian carcinoma	Three ovarian cancer cell lines (PEO1, PEO4, and PEO6) were derived from a BRCA2...	BeFree	19654294	Detail

Annotation

Annotations

Descrption	Source	Links
NM_000059.4(BRCA2):c.4965C>A (p.Tyr1655Ter) AND Breast-ovarian cancer, familial, susceptibility to, ...	ClinVar	Detail
NM_000059.4(BRCA2):c.4965C>A (p.Tyr1655Ter) AND Hereditary breast ovarian cancer syndrome	ClinVar	Detail
NM_000059.4(BRCA2):c.4965C>A (p.Tyr1655Ter) AND not provided	ClinVar	Detail
NM_000059.4(BRCA2):c.4965C>A (p.Tyr1655Ter) AND Hereditary cancer-predisposing syndrome	ClinVar	Detail
NM_000059.4(BRCA2):c.4965C>A (p.Tyr1655Ter) AND Familial cancer of breast	ClinVar	Detail
NM_000059.4(BRCA2):c.4965C>A (p.Tyr1655Ter) AND FLG-related disorder	ClinVar	Detail
NA	DisGeNET	Detail
NA	DisGeNET	Detail
NA	DisGeNET	Detail
NA	DisGeNET	Detail
NA	DisGeNET	Detail
Three ovarian cancer cell lines (PEO1, PEO4, and PEO6) were derived from a BRCA2 mutation [5193C>...	DisGeNET	Detail
Three ovarian cancer cell lines (PEO1, PEO4, and PEO6) were derived from a BRCA2 mutation [5193C>...	DisGeNET	Detail
Three ovarian cancer cell lines (PEO1, PEO4, and PEO6) were derived from a BRCA2 mutation [5193C>...	DisGeNET	Detail

Overlapped Transcript Coordinates

Gene	Transcript ID	Exon Number	Chromosome	Start	Stop	Type	Amino Mutation	Transcript Position	Links

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs80358721 dbSNP
Genome: hg19
Position: chr13:32,913,457-32,913,457
Variant Type: snv
Reference Allele: C
Alternative Allele: A

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